| CTissueForge::io::_IOElementT< T > | Intermediate I/O class for reading/writing Tissue Forge objects to/from file/string |
| ►CGL::AbstractShaderProgram | |
| CTissueForge::shaders::Flat3D | |
| CTissueForge::shaders::ParticleSphereShader | |
| CTissueForge::shaders::Phong | |
| CTissueForge::Angle | A bond concerning an angle |
| CTissueForge::cuda::Angle | |
| CTissueForge::rendering::Angle3DInstanceData | |
| CTissueForge::cuda::AngleConfig | CUDA runtime control interface for Tissue Forge angles |
| CTissueForge::AngleHandle | A handle to an angle bond |
| ►CTissueForge::rendering::Application | |
| CTissueForge::rendering::GlfwApplication | |
| CTissueForge::rendering::WindowlessApplication | |
| CTissueForge::rendering::ApplicationConfig | |
| ►CTissueForge::rendering::ArcBall | |
| CTissueForge::rendering::ArcBallCamera | |
| CTissueForge::rendering::ArcBallInteractor | |
| ►CTissueForge::rendering::ArrowData | Vector visualization specification |
| CTissueForge::models::center::CellPolarity::PolarityArrowData | |
| CTissueForge::rendering::ArrowInstanceData | |
| CTissueForge::models::vertex::Body | The mesh body is a volume-enclosing object of mesh surfaces |
| CTissueForge::models::vertex::BodyHandle | A handle to a Body |
| CTissueForge::Bond | Bonds apply a potential to a particular set of particles |
| CTissueForge::cuda::Bond | |
| CTissueForge::rendering::Bond3DInstanceData | |
| CTissueForge::cuda::BondConfig | CUDA runtime control interface for Tissue Forge bonds |
| CTissueForge::BondHandle | Handle to a bond |
| CTissueForge::rendering::BondsInstanceData | |
| CTissueForge::BoundaryCondition | A condition on a boundary of the universe |
| CTissueForge::cuda::BoundaryCondition | |
| CTissueForge::BoundaryConditions | Serves as a container for the six instances of the :class:BoundaryCondition object |
| CTissueForge::cuda::BoundaryConditions | |
| ►CTissueForge::BoundaryConditionsArgsContainer | |
| CTissueForge::py::BoundaryConditionsArgsContainerPy | |
| CTissueForge::btree | |
| CTissueForge::btree_node | |
| CTissueForge::cellpair | |
| CTissueForge::celltuple | |
| CTissueForge::rendering::ClipPlane | |
| CTissueForge::rendering::ClipPlanes | |
| CTissueForge::rendering::ColorMapper | The color mapping type |
| CTissueForge::util::CompileFlags | |
| CTissueForge::Simulator::Config | |
| CTissueForge::cuda::CUDAContext | A convenience wrap of the CUDA context for JIT-compiled Tissue Forge programs |
| CTissueForge::cuda::CUDADevice | A simple interface with a CUDA device |
| CTissueForge::cuda::CUDAFunction | A CUDA kernel from a JIT-compiled Tissue Forge program |
| CTissueForge::cuda::CUDARTProgram | A JIT-compiled CUDA Tissue Forge program |
| CTissueForge::cuda::CUDARTSource | Convenience class for loading source from file and storing, here intended for CUDA |
| CTissueForge::util::Differentiator | |
| CTissueForge::Dihedral | |
| CTissueForge::DihedralHandle | A handle to a dihedral bond |
| CTissueForge::cuda::DPDPotentialData | |
| CTissueForge::rendering::EGLInfo | |
| CTissueForge::engine | |
| CTissueForge::engine_comm | |
| CTissueForge::engine_set | |
| CTissueForge::cuda::EngineConfig | CUDA runtime control interface for Tissue Forge engine |
| CTissueForge::Error | |
| ►CTissueForge::event::EventBase | |
| CTissueForge::event::Event | |
| ►CTissueForge::event::ParticleEvent | |
| CTissueForge::event::ParticleEventSingle | |
| ►CTissueForge::py::ParticleEventPy | |
| CTissueForge::py::ParticleEventSinglePy | |
| ►CTissueForge::event::ParticleTimeEvent | |
| CTissueForge::py::ParticleTimeEventPy | |
| CTissueForge::event::TimeEvent | |
| CTissueForge::py::EventPy | |
| CTissueForge::py::TimeEventPy | |
| ►CTissueForge::event::EventBaseList | |
| CTissueForge::event::EventListT< event_t > | |
| CTissueForge::py::EventPyExecutor< event_t > | |
| ►CTissueForge::py::EventPyExecutor< event::KeyEvent > | |
| CTissueForge::py::KeyEventPyExecutor | |
| ►CTissueForge::py::EventPyExecutor< EventPy > | |
| CTissueForge::py::EventPyInvokePyExecutor | |
| CTissueForge::py::EventPyPredicatePyExecutor | |
| ►CTissueForge::py::EventPyExecutor< ParticleEventPy > | |
| CTissueForge::py::ParticleEventPyInvokePyExecutor | |
| CTissueForge::py::ParticleEventPyPredicatePyExecutor | |
| ►CTissueForge::py::EventPyExecutor< ParticleTimeEventPy > | |
| CTissueForge::py::ParticleTimeEventPyInvokePyExecutor | |
| CTissueForge::py::ParticleTimeEventPyPredicatePyExecutor | |
| ►CTissueForge::py::EventPyExecutor< TimeEventPy > | |
| CTissueForge::py::TimeEventPyInvokePyExecutor | |
| CTissueForge::py::TimeEventPyPredicatePyExecutor | |
| CTissueForge::exclusion | |
| CTissueForge::io::FIO | Tissue Forge data import/export interface |
| CTissueForge::io::FIOImportSummary | Tissue Forge data import summary |
| ►CTissueForge::io::FIOModule | Interface for Tissue Forge peripheral module I/O (e.g., models) |
| CTissueForge::models::vertex::io::VertexSolverFIOModule | |
| CTissueForge::cuda::Flux | |
| CTissueForge::Flux | |
| CTissueForge::cuda::Fluxes | |
| CTissueForge::Fluxes | A flux is defined between a pair of types, and acts on the state vector between a pair of instances |
| CTissueForge::cuda::FluxTypeIdPair | |
| ►CTissueForge::Force | Force is a metatype, in that Tissue Forge has lots of different instances of force functions, that have different attributes, but only have one base type |
| CTissueForge::Berendsen | Berendsen force |
| ►CTissueForge::CustomForce | A custom force function |
| CTissueForge::py::CustomForcePy | |
| CTissueForge::ForceSum | |
| CTissueForge::Friction | Friction force |
| CTissueForge::Gaussian | Random force |
| CTissueForge::models::center::CellPolarity::PersistentForce | Defines a force due to polarity state |
| CTissueForge::Simulator::GLConfig | OpenGL context configuration |
| ►CMagnum::Platform::GlfwApplication | |
| CTissueForge::rendering::GlfwApplication | |
| CTissueForge::rendering::GLInfo | |
| Cstd::hash< TissueForge::models::vertex::BodyHandle > | |
| Cstd::hash< TissueForge::models::vertex::SurfaceHandle > | |
| Cstd::hash< TissueForge::models::vertex::VertexHandle > | |
| CTissueForge::io::IOElement | Container for _IOElement |
| CTissueForge::event::KeyEvent | |
| CTissueForge::Logger | |
| CTissueForge::LoggingBuffer | |
| ►CMatrix3Base | |
| CTissueForge::types::TMatrix3< T > | |
| ►CMatrix4Base | |
| CTissueForge::types::TMatrix4< float > | |
| CTissueForge::types::TMatrix4< T > | |
| ►CMatrixBase | |
| CTissueForge::types::TMatrixS< size, T > | |
| CTissueForge::models::vertex::Mesh | Contains all Vertex, Surface and Body instances |
| CTissueForge::models::vertex::MeshLogEvent | An event for the logger |
| CTissueForge::models::vertex::MeshLogger | The Tissue Forge vertex model solver logger |
| ►CTissueForge::models::vertex::MeshObjActor | Base definition of how a mesh object acts on another mesh object |
| CTissueForge::models::vertex::BodyForce | Imposes a body force on Body instances |
| CTissueForge::models::vertex::ConvexPolygonConstraint | Imposes that surfaces are convex |
| CTissueForge::models::vertex::EdgeTension | Models tension between connected vertices |
| CTissueForge::models::vertex::FlatSurfaceConstraint | Imposes that surfaces remain flat |
| ►CTissueForge::models::vertex::MeshObjTypePairActor | Base definition of how a mesh object of a type acts on another mesh object through interactions with a mesh object of another type |
| CTissueForge::models::vertex::Adhesion | Models adhesion between pairs of Surface or Body instances by type |
| CTissueForge::models::vertex::NormalStress | Models a stress acting on a Surface along its normal |
| CTissueForge::models::vertex::PerimeterConstraint | Imposes a perimeter constraint on a surface |
| CTissueForge::models::vertex::SurfaceAreaConstraint | Imposes a surface area constraint on Body or Surface instances |
| CTissueForge::models::vertex::SurfaceTraction | Models a traction force |
| CTissueForge::models::vertex::VolumeConstraint | Imposes a volume constraint |
| ►CTissueForge::models::vertex::MeshObjType | Base mesh object type definition |
| CTissueForge::models::vertex::BodyType | Mesh body type |
| CTissueForge::models::vertex::SurfaceType | Mesh surface type |
| CTissueForge::models::vertex::MeshQuality | An object that schedules topological operations on a mesh to maintain its quality |
| ►CTissueForge::models::vertex::MeshQualityOperation | An operation that modifies the topology of a mesh to improve its quality |
| CTissueForge::models::vertex::CustomQualityOperation | Custom mesh quality operation |
| CTissueForge::models::vertex::MeshSolverTimerInstance | Convenience class to time mesh solver performance |
| CTissueForge::models::vertex::MeshSolverTimers | Mesh solver performance timers |
| CTissueForge::io::MetaData | Tissue Forge meta data |
| CTissueForge::Pair | |
| CTissueForge::cuda::Particle | |
| ►CTissueForge::Particle | |
| CTissueForge::Cluster | The cluster analogue to :class:Particle |
| ►CTissueForge::ParticleHandle | A handle to a particle |
| CTissueForge::ClusterParticleHandle | The cluster analogue to :class:ParticleHandle |
| CTissueForge::ParticleList | A special list with convenience methods for working with sets of particles |
| ►CTissueForge::ParticleType | Structure containing information on each particle type |
| CTissueForge::ClusterParticleType | The cluster analogue to :class:ParticleType |
| CTissueForge::models::vertex::MeshParticleType | |
| CTissueForge::ParticleTypeList | A special list with convenience methods for working with sets of particle types |
| CTissueForge::util::PerformanceTimer | |
| CTissueForge::rendering::Plane3DInstanceData | |
| CTissueForge::cuda::Potential | |
| ►CTissueForge::Potential | A Potential object is a compiled interpolation of a given function. The Universe applies potentials to particles to calculate the net force on them |
| CTissueForge::DPDPotential | |
| CTissueForge::models::center::CellPolarity::ContactPotential | Defines polarity state dynamics and anisotropic adhesion |
| CTissueForge::py::PotentialPy | |
| CTissueForge::cuda::PotentialData | |
| ►CQuaternionBase | |
| CTissueForge::types::TQuaternion< T > | |
| CTissueForge::queue | |
| CTissueForge::cuda::queue_cuda | |
| ►CTissueForge::rendering::Renderer | |
| CTissueForge::rendering::UniverseRenderer | |
| CTissueForge::rigid | |
| CTissueForge::runner | |
| CTissueForge::runner_fifo | |
| CTissueForge::SecreteUptake | |
| ►CTissueForge::Simulator | The Simulator is the entry point to simulation, this is the very first object that needs to be initialized before any other method can be called. All the methods of the Simulator are static, but the constructor needs to be called first to initialize everything |
| CTissueForge::py::SimulatorPy | |
| CTissueForge::cuda::SimulatorConfig | CUDA runtime control interface for Simulator |
| CTissueForge::space | |
| CTissueForge::space_cell | Space_cell structure |
| CTissueForge::state::Species | The Tissue Forge species object |
| CTissueForge::state::SpeciesList | |
| CTissueForge::state::SpeciesValue | A working valued-object of an underlying Species attached to an object |
| CTissueForge::rendering::SphereInstanceData | |
| CTissueForge::state::StateVector | A state vector of an object |
| CTissueForge::rendering::Style | The Tissue Forge style type |
| ►CTissueForge::SubEngine | A SubEngine is a singleton object that injects dynamics into the Tissue Forge engine. It does not necessarily integrate any object in time, but can also simply add to the dynamics of existing Tissue Forge objects. Tissue Forge supports an arbitrary number of subengines with multi-threading and GPU support |
| CTissueForge::models::vertex::MeshSolver | Vertex model mesh solver |
| ►CTissueForge::rendering::SubRenderer | |
| CTissueForge::models::vertex::MeshRenderer | |
| CTissueForge::rendering::AngleRenderer | |
| CTissueForge::rendering::AngleRenderer3D | |
| CTissueForge::rendering::ArrowRenderer | Vector renderer |
| CTissueForge::rendering::BondRenderer | |
| CTissueForge::rendering::BondRenderer3D | |
| CTissueForge::rendering::DihedralRenderer | |
| CTissueForge::rendering::DihedralRenderer3D | |
| CTissueForge::rendering::OrientationRenderer | Orientaton renderer |
| CTissueForge::models::vertex::Surface | The mesh surface is an area-enclosed object of implicit mesh edges defined by mesh vertices |
| CTissueForge::models::vertex::SurfaceHandle | A handle to a Surface |
| CTissueForge::task | |
| CTissueForge::cuda::task_cuda | |
| CTissueForge::ThreadPool | |
| CTissueForge::io::ThreeDFComponentContainer | |
| CTissueForge::io::ThreeDFEdgeData | 3D data file edge data |
| CTissueForge::io::ThreeDFFaceData | 3D data file face data |
| CTissueForge::io::ThreeDFIO | |
| CTissueForge::io::ThreeDFMeshData | 3D data file mesh data |
| ►CTissueForge::io::ThreeDFMeshGenerator | |
| CTissueForge::io::ThreeDFAngleMeshGenerator | |
| CTissueForge::io::ThreeDFBondMeshGenerator | |
| CTissueForge::io::ThreeDFDihedralMeshGenerator | |
| CTissueForge::io::ThreeDFPCloudMeshGenerator | |
| CTissueForge::io::ThreeDFRenderData | |
| CTissueForge::io::ThreeDFStructure | Container for relevant data found in a 3D data file |
| CTissueForge::io::ThreeDFVertexData | 3D data file vertex data |
| CTissueForge::TypeIdPair | |
| CTissueForge::Universe | The universe is a top level singleton object, and is automatically initialized when the simulator loads. The universe is a representation of the physical universe that we are simulating, and is the repository for all physical object representations |
| CTissueForge::UniverseConfig | Initialize an #engine with the given data |
| ►CVector2Base | |
| CTissueForge::types::TVector2< int > | |
| CTissueForge::types::TVector2< FloatP_t > | |
| CTissueForge::types::TVector2< T > | |
| ►CVector3Base | |
| CTissueForge::types::TVector3< FloatP_t > | |
| CTissueForge::types::TVector3< int > | |
| CTissueForge::types::TVector3< float > | |
| CTissueForge::types::TVector3< T > | |
| ►CVector4Base | |
| CTissueForge::types::TVector4< int > | |
| CTissueForge::types::TVector4< T > | |
| ►CVectorBase | |
| CTissueForge::types::TVectorS< size, T > | |
| CTissueForge::verlet_entry | |
| CTissueForge::models::vertex::Vertex | The mesh vertex is a volume of a mesh centered at a point in a space |
| CTissueForge::shaders::ParticleSphereShader::Vertex | |
| CTissueForge::models::vertex::VertexHandle | A handle to a Vertex |
| CTissueForge::models::vertex::io::VertexSolverFIOImportSummary | Vertex solver module data import summary |
| CTissueForge::util::WallTime | |
| ►CTissueForge::rendering::Window | |
| CTissueForge::rendering::GlfwWindow | |
| ►CMagnum::Platform::WindowlessApplication | |
| CTissueForge::rendering::WindowlessApplication | |
1.10.0